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Open repository for EU-funded research outputs from Horizon Europe, Euratom, and earlier Framework Programmes.
Recent uploads
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* March 5, 2025 (release-06-03-2025)
Software
Open
[HardwarePerformanceArchive/Archive: (v1.1.1) 06-03-2025](/records/14977204)
[Kent Vejrup Madsen](/search?q=metadata.creators.person_or_org.name:Kent Vejrup Madsen "Kent Vejrup Madsen: Search")
SHA256 | File extension | Hash checksum | | :------------------ | --------------------------------------------------------------------------------------- | | zip | ...
Uploaded on March 5, 2025
**Part of [Hardware Performance Archive](/communities/hpa "Hardware Performance Archive: Search")**
12 more versions exist for this record
291
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115
Downloads
* March 5, 2025 (v1.0.0)
Software
Open
[HeatMap\_Tables\_Python](/records/14977229)
[Rodolfo Aramayo](/search?q=metadata.creators.person_or_org.name:Rodolfo Aramayo "Rodolfo Aramayo: Search")
HeatMap\_Tables Overview: -------------------------------------------------------------------------------- The script reads a TSV file containing numeric data and generates a heatmap visualization. It is designed to be flexible by adjusting fonts and figure size based on the input data dimensions. Key Functions: Argument Parsing: ...
Uploaded on March 5, 2025
**Part of [Aramayo\_Lab](/communities/aramayo_lab "Aramayo_Lab: Search")**
15
Views
11
Downloads
* March 5, 2025 (v1)
Software
Open
[Data from: The role of migration in the change of Northern Hemisphere vegetation for the past 50,000 years](/records/13284698)
[Zani, Deborah](/search?q=metadata.creators.person_or_org.name:Zani, Deborah "Zani, Deborah: Search") [](https://orcid.org/0000-0002-3302-2893 "Zani, Deborah: ORCID profile") [Lischke, Heike](/search?q=metadata.creators.person_or_org.name:Lischke, Heike "Lischke, Heike: Search") [Lehsten, Veiko](/search?q=metadata.creators.person_or_org.name:Lehsten, Veiko "Lehsten, Veiko: Search")
Our primary aim was to assess how dispersal limitation affected forest changes in the Northern Hemisphere during the last glacial cycle, and especially after the last deglaciation. We used the LPJ-GM 2.0 dynamic global vegetation model to simulate the vegetation dynamics of the Northern Hemisphere over the past 50,000 years. We compared two...
Uploaded on March 5, 2025
**Part of [Dryad](/communities/dryad "Dryad: Search")**
18
Views
0
Downloads
* March 5, 2025 (0.1.3)
Software
Open
[github.com/aofarrel/goleft-wdl/indexcov](/records/14977209)
[Ash O'Farrell](/search?q=metadata.creators.person_or_org.name:Ash O'Farrell "Ash O'Farrell: Search")
Runs goleft indexcov. If running on Terra download indexDir to read indexcov's HTML output.
Uploaded on March 5, 2025
**Part of [Dockstore](/communities/dockstore "Dockstore: Search")**
16
Views
2
Downloads
* March 5, 2025 (0.1.3)
Software
Open
[github.com/aofarrel/goleft-wdl/covstats\_and\_indexcov](/records/14977207)
[Ash O'Farrell](/search?q=metadata.creators.person_or_org.name:Ash O'Farrell "Ash O'Farrell: Search")
Runs goleft covstats and goleft indexcov, then parses output to extract read length and coverage. If running on Terra download indexDir to read indexcov's HTML output.
Uploaded on March 5, 2025
**Part of [Dockstore](/communities/dockstore "Dockstore: Search")**
13
Views
6
Downloads
* March 5, 2025 (2.16.5)
Software
Open
[github.com/aofarrel/clockwork-wdl/clockwork\_tuberculosis\_example](/records/14977179)
[Ash O'Farrell](/search?q=metadata.creators.person_or_org.name:Ash O'Farrell "Ash O'Farrell: Search")[](https://orcid.org/0000-0003-4896-1858 "Ash O'Farrell: ORCID profile")
\# clockwork-wdl A WDLization + Dockerization of some parts of the \*Mycobacterium tuberculosis\* toolkit \[clockwork\](https://github.com/iqbal-lab-org/clockwork), focusing on functions used by \[this walkthrough\](https://github.com/iqbal-lab-org/clockwork/wiki/Walkthrough-scripts-only). Supports (and sometimes requires) tarball inputs -- please...
Uploaded on March 5, 2025
**Part of [Dockstore](/communities/dockstore "Dockstore: Search")**
13
Views
10
Downloads
* March 5, 2025 (2.16.5)
Software
Open
[github.com/aofarrel/clockwork-wdl/clockwork\_reference\_prepare](/records/14977177)
[Ash O'Farrell](/search?q=metadata.creators.person_or_org.name:Ash O'Farrell "Ash O'Farrell: Search")[](https://orcid.org/0000-0003-4896-1858 "Ash O'Farrell: ORCID profile")
\# clockwork-wdl A WDLization + Dockerization of some parts of the \*Mycobacterium tuberculosis\* toolkit \[clockwork\](https://github.com/iqbal-lab-org/clockwork), focusing on functions used by \[this walkthrough\](https://github.com/iqbal-lab-org/clockwork/wiki/Walkthrough-scripts-only). Supports (and sometimes requires) tarball inputs -- please...
Uploaded on March 5, 2025
**Part of [Dockstore](/communities/dockstore "Dockstore: Search")**
15
Views
10
Downloads
* March 5, 2025 (2.16.5)
Software
Open
[github.com/aofarrel/clockwork-wdl/clockwork\_gvcf\_from\_minos\_and\_samtools](/records/14977175)
[Ash O'Farrell](/search?q=metadata.creators.person_or_org.name:Ash O'Farrell "Ash O'Farrell: Search")[](https://orcid.org/0000-0003-4896-1858 "Ash O'Farrell: ORCID profile")
\# clockwork-wdl A WDLization + Dockerization of some parts of the \*Mycobacterium tuberculosis\* toolkit \[clockwork\](https://github.com/iqbal-lab-org/clockwork), focusing on functions used by \[this walkthrough\](https://github.com/iqbal-lab-org/clockwork/wiki/Walkthrough-scripts-only). Supports (and sometimes requires) tarball inputs -- please...
Uploaded on March 5, 2025
**Part of [Dockstore](/communities/dockstore "Dockstore: Search")**
11
Views
6
Downloads
* March 5, 2025 (v1)
Software
Open
[Kinetic modules in biochemical networks/ Upstream Algorithm](/records/14970313)
[Langary, Damoun](/search?q=metadata.creators.person_or_org.name:Langary, Damoun "Langary, Damoun: Search") [Kueken, Anika](/search?q=metadata.creators.person_or_org.name:Kueken, Anika "Kueken, Anika: Search") [](https://orcid.org/0000-0003-1367-0719 "Kueken, Anika: ORCID profile") [Nikoloski, Zoran](/search?q=metadata.creators.person_or_org.name:Nikoloski, Zoran "Nikoloski, Zoran: Search")
Modules represent fundamental building blocks of cellular networks, and are thought to facilitate robustness of phenotypes against perturbations. While reaction kinetic shapes the concentration of components and reaction rates, its use in identification of modules entails knowledge of parameter values. Here we demonstrate that kinetic modules...
Uploaded on March 5, 2025
**Part of [Dryad](/communities/dryad "Dryad: Search")**
18
Views
2
Downloads
* March 5, 2025 (v2)
Dataset
Open
[BTS Results](/records/14976500)
[Kuksa, Pavel](/search?q=metadata.creators.person_or_org.name:Kuksa, Pavel "Kuksa, Pavel: Search") [](https://orcid.org/0000-0003-2248-6403 "Kuksa, Pavel: ORCID profile") [Carter, Luke](/search?q=metadata.creators.person_or_org.name:Carter, Luke "Carter, Luke: Search")[](https://orcid.org/0009-0008-2275-6323 "Carter, Luke: ORCID profile")
BTS Documentation can be found in the wiki corresponding to the Bitbucket repository:https://bitbucket.org/wanglab-upenn/bts-docker/wiki/Home To run the test dataset, follow the instructions described in "Getting Started":https://bitbucket.org/wanglab-upenn/bts-docker/wiki/Getting%20StartedSample data used during testing is available in the...
Uploaded on March 5, 2025
**Part of [BTS Working Group - UPenn](/communities/bts-fg-upenn "BTS Working Group - UPenn: Search")**
1 more version exist for this record
39
Views
13
Downloads
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