🏳️Bring structure to your research - protocols.io

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Bring **structure** to your research

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A secure platform for developing and sharing reproducible methods.

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*   [biology](/view/mcscrb-seq-protocol-p9kdr4w)

*   [chemistry](/view/measuring-leaf-carbon-fractions-with-the-ankom2000-yinfude)

*   [computational workflows](/view/de-novo-transcriptome-assembly-workflow-ghebt3e)

*   [clinical trials](/view/collection-of-protocols-and-guidelines-for-phase-3-bj5pkq5n)

*   [operational procedures](/view/standard-operating-procedure-for-culturing-bordete-kq9cvz6)

*   [safety checklists](/view/safety-protocols-for-aquatic-microbial-ecology-res-6mmhc46)

*   [instructions / manuals](/view/ncbi-submission-protocol-for-microbial-pathogen-su-bdvii64e)

*   [biology](/view/mcscrb-seq-protocol-p9kdr4w)

*   [chemistry](/view/measuring-leaf-carbon-fractions-with-the-ankom2000-yinfude)

*   [computational workflows](/view/de-novo-transcriptome-assembly-workflow-ghebt3e)

*   [clinical trials](/view/collection-of-protocols-and-guidelines-for-phase-3-bj5pkq5n)

*   [operational procedures](/view/standard-operating-procedure-for-culturing-bordete-kq9cvz6)

*   [safety checklists](/view/safety-protocols-for-aquatic-microbial-ecology-res-6mmhc46)

*   [instructions / manuals](/view/ncbi-submission-protocol-for-microbial-pathogen-su-bdvii64e)

### Organize & collaborate

Central and secure place to organize up-to-date/versionable methods with history and concurrent editing.

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### Accelerate research

Dynamic and interactive methods, runnable, precise.

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### Avoid mistakes

Create and discover reproducible experimental and computational methods with video, reagents, detailed parameters, and more.

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protocols.iofor biotechs and pharmaceuticals

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Private & secure collaboration w/ HIPAA compliance, audit trail, approval/signature (21 CFR Part 11), 2-factor authentication, encryption, VPC, and more.

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We have used protocols.io as a resource for our collaborators across the global GenomeTrakr community. The platform allows users to comment on specific steps, enabling us to identify and track steps that need clarification or updating. Keeping our protocols current is also easier, since version control is built into the platform. We can easily publish new versions as technology and software evolve and improve overtime, while preserving previous versions for method reproducibility.

Ruth E. Timme, Ph.D.

Research Microbiologist at the Office of Regulatory Science, Center for Food Safety and applied Nutrition, U.S. Food and Drug Administration

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Having a private workspace on protocols.io is indispensable to our biotech. We use it daily to help with reproducibility and collaboration across our multiple locations.

Dr. Anitha Jakaprakash

CEO, Girihlet

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protocols.iofor universities, nonprofits, and government agencies/labs

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A protocols.io Institutional Plan increases productivity, facilitates teaching, improves collaboration and recordkeeping, and accelerates progress across most research disciplines.

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We use protocols.io to share full protocols from our research with other scientists. We appreciate being able to share full protocols beyond abbreviated methods sections. The versioning of protocols is especially powerful so that we can identify the exact version of a protocol used in an experiment, which increases reproducibility.

Dr. Stephen Floor

Assistant Professor, UCSF

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Our Premium account enables an unlimited number of individuals and groups to use the platform for private methods. At UCSF, we saw the number of users double and the number of private protocols almost triple in the first seven months of our membership. We anticipate that this use will translate into more rigorous and reproducible research methods used by UC researchers.

Anneliese Taylor

Head of Scholarly Communication, UCSF Library

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Featured protocols

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[

### Using dynamic headspace collections for bacterial volat...

Barbora Novakova, John Caulfield, David Withall, ..., Gareth Thomas

dx.doi.org/10.17504/protocols.io.kqdg3q4eev25/v1

](https://protocols.io/view/using-dynamic-headspace-collections-for-bacterial-dqs85whw)[

### ELISA-based quantitative detection of peptides in plant...

Maurice Koenig, Zarah Sorger, Shania Keh, ..., Johana Misas Villamil

dx.doi.org/10.17504/protocols.io.n92ld8k67v5b/v1

](https://protocols.io/view/elisa-based-quantitative-detection-of-peptides-in-dnxj5fkn)[

### Inhibitor removal from DNA extracts

Dominik Buchner, Marie Borowski

dx.doi.org/10.17504/protocols.io.rm7vzbp54vx1/v1

](https://protocols.io/view/inhibitor-removal-from-dna-extracts-cs9ewh3e)[

### General Setup and Takedown Procedures for Rodent Neuros...

Avalon Amaya, Jackie Swapp, Ali Williford, Robert E Howard

dx.doi.org/10.17504/protocols.io.kqdg392o7g25/v2

](https://protocols.io/view/general-setup-and-takedown-procedures-for-rodent-n-df2k3qcw)[

### Cryo-fixation and resin embedding of biological samples...

Benoit Gallet, Christine Moriscot, Guy Schoehn, Johan Decelle

dx.doi.org/10.17504/protocols.io.bp2l62kndgqe/v1

](https://protocols.io/view/cryo-fixation-and-resin-embedding-of-biological-sa-dasy2efw)[

### A low cost time-lapse imaging system for Hydra

Callen Hyland

dx.doi.org/10.17504/protocols.io.kxygx36xwg8j/v1

](https://protocols.io/view/a-low-cost-time-lapse-imaging-system-for-hydra-c9gyz3xw)[

### High Throughput Flow Cytometry for Viral Enumeration of...

Madeline Bellanger, Pieter Visscher, Richard Allen White III

](https://protocols.io/view/high-throughput-flow-cytometry-for-viral-enumerati-dmtz46p6)

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Featured workspaces

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### GenomeTrakr

FDA pathogen surveillance protocols

](https://www.protocols.io/workspaces/genometrakr1/publications?sort=views)[

### Coronavirus Method Development Community

](https://www.protocols.io/workspaces/coronavirus-method-development-community)[

### Human Cell Atlas Method Development Community

](https://www.protocols.io/workspaces/hca)[

### High molecular weight DNA extraction from all kingdoms

](https://www.protocols.io/workspaces/high-molecular-weight-dna-extraction-from-all-kingdoms/publications?sort=views)[

### NCIHTAN

NCI Human Tumor Atlas Network

](https://www.protocols.io/workspaces/ncihtan/publications?sort=views)

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*   [](https://www.moore.org/grants/list/GBMF4733)

*   [](https://www.openphilanthropy.org/)

*   [](https://chanzuckerberg.com/)

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